BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032D05SP1|AL429562
(898 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1230 1760 0.0
>3x_Contig1230
Length = 5522
Score = 1760 bits (887), Expect = 0.0
Identities = 893/896 (99%)
Strand = Plus / Minus
Query: 3 aaagctctgaaatcaacggcatctgcatcattgtctcccatattgtctattcacgagtac 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1116 aaagctctgaaatcaacggcatctgcatcattgtctcccatattgtctattcacgagtac 1057
Query: 63 tacaataacctcaatgtatctatcgtgttgtataccgacttgtaaactctattttacttt 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1056 tacaataacctcaatgtatctatcgtgttgtataccgacttgtaaactctattttacttt 997
Query: 123 actttcttacatgatatttccctcttcccttaaggaagatcatctgctttttaaaggttt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 996 actttcttacatgatatttccctcttcccttaaggaagatcatctgctttttaaaggttt 937
Query: 183 ttcatgttgagaaaagaatcgttcaagtgcaaaaaggcgtattgatgatgatgagacata 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 ttcatgttgagaaaagaatcgttcaagtgcaaaaaggcgtattgatgatgatgagacata 877
Query: 243 cgttagtcagggcacattcagagcaatactgagccaatatttgtacatttttttgctgaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 876 cgttagtcagggcacattcagagcaatactgagccaatatttgtacatttttttgctgaa 817
Query: 303 gtttatacagggtggaattatatacatatttaagtgtacataagtgtatcgatacttctg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 gtttatacagggtggaattatatacatatttaagtgtacataagtgtatcgatacttctg 757
Query: 363 tacagcgaatacttcatcttaagaacatccaccacaataagaatacgaaaaagaatgcta 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 tacagcgaatacttcatcttaagaacatccaccacaataagaatacgaaaaagaatgcta 697
Query: 423 tgatcgcmattggcgcgtactggctaatcaataggtcgaagttgatcttttgtgcggagg 482
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tgatcgcaattggcgcgtactggctaatcaataggtcgaagttgatcttttgtgcggagg 637
Query: 483 ctctgtactttttagcgtcttgtcttagggacgcactcatatcactcatcttatccaagg 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ctctgtactttttagcgtcttgtcttagggacgcactcatatcactcatcttatccaagg 577
Query: 543 aatcacctctgtacaatagatcttcgatgttttttgtcatgatttgtttgacacctttta 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 aatcacctctgtacaatagatcttcgatgttttttgtcatgatttgtttgacacctttta 517
Query: 603 gatcctgattcaattggtccatgttcccctgtactcttttgtcgttgtaaaccttcttgg 662
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 516 gatcctgattcaattggtccatgttcccctgtactcttttgtcgttgtaaactttcttgg 457
Query: 663 ncttttgtaagaagttgtcgaaggatacgaactcatacggtctaacgttcgatttcgaga 722
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tcttttgtaagaagttgtcgaaggatacgaactcatacggtctaacgttcgatttcgaga 397
Query: 723 gttgtcccccgtaactgtgttcgaattcttgttgtatatctgccaagtatgagaatgcca 782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gttgtcccccgtaactgtgttcgaattcttgttgtatatctgccaagtatgagaatgcca 337
Query: 783 aattacgtggatagttcctttctgcgaccacaatatagaccacggtgttcaatctgatat 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aattacgtggatagttcctttctgcgaccacaatatagaccacggtgttcaatctgatat 277
Query: 843 aatggatctcgaaatcaccactttccactgtagcctcgtttgctgacgtcggagtg 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 aatggatctcgaaatcaccactttccactgtagcctcgtttgctgacgtcggagtg 221
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6539
Number of Sequences: 1807
Number of extensions: 6539
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 898
length of database: 10,358,551
effective HSP length: 16
effective length of query: 882
effective length of database: 10,329,639
effective search space: 9110741598
effective search space used: 9110741598
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)